Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI74268.1 | CVI75053.1 | AWB65_00020 | AWB65_00419 | Transglycosylase SLT domain-containing protein. | Outer membrane protein, (porin). | 0.724 |
CVI74268.1 | CVI76449.1 | AWB65_00020 | AWB65_01092 | Transglycosylase SLT domain-containing protein. | Glycosyltransferase. | 0.759 |
CVI74268.1 | CVI77044.1 | AWB65_00020 | AWB65_01402 | Transglycosylase SLT domain-containing protein. | Porin. | 0.743 |
CVI74268.1 | CVI78025.1 | AWB65_00020 | AWB65_01893 | Transglycosylase SLT domain-containing protein. | Signal peptide protein. | 0.576 |
CVI74268.1 | CVI80631.1 | AWB65_00020 | AWB65_03148 | Transglycosylase SLT domain-containing protein. | Porin. | 0.749 |
CVI74268.1 | CVI80693.1 | AWB65_00020 | AWB65_03185 | Transglycosylase SLT domain-containing protein. | Outer membrane protein (porin). | 0.726 |
CVI74268.1 | CVI81609.1 | AWB65_00020 | AWB65_03645 | Transglycosylase SLT domain-containing protein. | Anti-anti-sigma regulatory factor. | 0.628 |
CVI74268.1 | CVI85723.1 | AWB65_00020 | AWB65_06009 | Transglycosylase SLT domain-containing protein. | Outer membrane protein, (porin). | 0.756 |
CVI74268.1 | CVI85857.1 | AWB65_00020 | AWB65_06143 | Transglycosylase SLT domain-containing protein. | Outer membrane protein (porin). | 0.733 |
CVI75053.1 | CVI74268.1 | AWB65_00419 | AWB65_00020 | Outer membrane protein, (porin). | Transglycosylase SLT domain-containing protein. | 0.724 |
CVI75053.1 | CVI76449.1 | AWB65_00419 | AWB65_01092 | Outer membrane protein, (porin). | Glycosyltransferase. | 0.759 |
CVI75053.1 | CVI77044.1 | AWB65_00419 | AWB65_01402 | Outer membrane protein, (porin). | Porin. | 0.588 |
CVI75053.1 | CVI78025.1 | AWB65_00419 | AWB65_01893 | Outer membrane protein, (porin). | Signal peptide protein. | 0.741 |
CVI75053.1 | CVI80631.1 | AWB65_00419 | AWB65_03148 | Outer membrane protein, (porin). | Porin. | 0.580 |
CVI75053.1 | CVI80693.1 | AWB65_00419 | AWB65_03185 | Outer membrane protein, (porin). | Outer membrane protein (porin). | 0.597 |
CVI75053.1 | CVI81609.1 | AWB65_00419 | AWB65_03645 | Outer membrane protein, (porin). | Anti-anti-sigma regulatory factor. | 0.663 |
CVI75053.1 | CVI85723.1 | AWB65_00419 | AWB65_06009 | Outer membrane protein, (porin). | Outer membrane protein, (porin). | 0.564 |
CVI75053.1 | CVI85857.1 | AWB65_00419 | AWB65_06143 | Outer membrane protein, (porin). | Outer membrane protein (porin). | 0.590 |
CVI76448.1 | CVI76449.1 | AWB65_01091 | AWB65_01092 | Multi anti extrusion protein MatE. | Glycosyltransferase. | 0.870 |
CVI76449.1 | CVI74268.1 | AWB65_01092 | AWB65_00020 | Glycosyltransferase. | Transglycosylase SLT domain-containing protein. | 0.759 |
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