Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI75029.1 | CVI77650.1 | AWB65_00406 | AWB65_01686 | Oxidoreductase. | Rhodanese. | 0.707 |
CVI75029.1 | CVI82432.1 | AWB65_00406 | AWB65_04054 | Oxidoreductase. | Beta-ketoacyl synthase. | 0.905 |
CVI75029.1 | CVI85584.1 | AWB65_00406 | AWB65_05870 | Oxidoreductase. | Nitrate reductase/sulfite reductase flavoprotein alpha-component. | 0.448 |
CVI77650.1 | CVI75029.1 | AWB65_01686 | AWB65_00406 | Rhodanese. | Oxidoreductase. | 0.707 |
CVI77650.1 | CVI77652.1 | AWB65_01686 | AWB65_01687 | Rhodanese. | Serine acetyltransferase. | 0.772 |
CVI77650.1 | CVI77654.1 | AWB65_01686 | AWB65_01688 | Rhodanese. | DNA-binding protein. | 0.688 |
CVI77650.1 | CVI77656.1 | AWB65_01686 | AWB65_01690 | Rhodanese. | Cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.719 |
CVI77650.1 | CVI82432.1 | AWB65_01686 | AWB65_04054 | Rhodanese. | Beta-ketoacyl synthase. | 0.928 |
CVI77650.1 | CVI85584.1 | AWB65_01686 | AWB65_05870 | Rhodanese. | Nitrate reductase/sulfite reductase flavoprotein alpha-component. | 0.690 |
CVI77650.1 | rplQ | AWB65_01686 | AWB65_03687 | Rhodanese. | 50S ribosomal protein L17. | 0.700 |
CVI77650.1 | rplU | AWB65_01686 | AWB65_03111 | Rhodanese. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.694 |
CVI77650.1 | rpsQ | AWB65_01686 | AWB65_03705 | Rhodanese. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.820 |
CVI77650.1 | ybeY | AWB65_01686 | AWB65_04322 | Rhodanese. | Unknown domain/putative metalloprotease fusion protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.865 |
CVI77652.1 | CVI77650.1 | AWB65_01687 | AWB65_01686 | Serine acetyltransferase. | Rhodanese. | 0.772 |
CVI77652.1 | CVI77654.1 | AWB65_01687 | AWB65_01688 | Serine acetyltransferase. | DNA-binding protein. | 0.779 |
CVI77652.1 | CVI77656.1 | AWB65_01687 | AWB65_01690 | Serine acetyltransferase. | Cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.636 |
CVI77654.1 | CVI77650.1 | AWB65_01688 | AWB65_01686 | DNA-binding protein. | Rhodanese. | 0.688 |
CVI77654.1 | CVI77652.1 | AWB65_01688 | AWB65_01687 | DNA-binding protein. | Serine acetyltransferase. | 0.779 |
CVI77654.1 | CVI77656.1 | AWB65_01688 | AWB65_01690 | DNA-binding protein. | Cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.560 |
CVI77656.1 | CVI77650.1 | AWB65_01690 | AWB65_01686 | Cysteine desulfurase, SufS family; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | Rhodanese. | 0.719 |
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