Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI75848.1 | CVI78689.1 | AWB65_00770 | AWB65_02196 | CheW protein. | CheA signal transduction histidine kinase. | 0.999 |
CVI75848.1 | CVI78691.1 | AWB65_00770 | AWB65_02197 | CheW protein. | Chemotaxis protein CheW. | 0.509 |
CVI75848.1 | CVI78693.1 | AWB65_00770 | AWB65_02198 | CheW protein. | MCP methyltransferase, CheR-type. | 0.965 |
CVI75848.1 | CVI78696.1 | AWB65_00770 | AWB65_02199 | CheW protein. | Chemotaxis-related protein. | 0.831 |
CVI75848.1 | CVI78698.1 | AWB65_00770 | AWB65_02200 | CheW protein. | Chemotaxis-related protein. | 0.984 |
CVI75848.1 | CVI84192.1 | AWB65_00770 | AWB65_04922 | CheW protein. | Chemotaxis protein CheA. | 0.999 |
CVI75848.1 | CVI84194.1 | AWB65_00770 | AWB65_04923 | CheW protein. | Chemotaxis protein CheW. | 0.867 |
CVI75848.1 | CVI86413.1 | AWB65_00770 | AWB65_06704 | CheW protein. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
CVI75848.1 | cheB-2 | AWB65_00770 | AWB65_02195 | CheW protein. | Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.965 |
CVI75848.1 | cheD | AWB65_00770 | AWB65_00566 | CheW protein. | Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.942 |
CVI78689.1 | CVI75848.1 | AWB65_02196 | AWB65_00770 | CheA signal transduction histidine kinase. | CheW protein. | 0.999 |
CVI78689.1 | CVI78691.1 | AWB65_02196 | AWB65_02197 | CheA signal transduction histidine kinase. | Chemotaxis protein CheW. | 0.999 |
CVI78689.1 | CVI78693.1 | AWB65_02196 | AWB65_02198 | CheA signal transduction histidine kinase. | MCP methyltransferase, CheR-type. | 0.996 |
CVI78689.1 | CVI78696.1 | AWB65_02196 | AWB65_02199 | CheA signal transduction histidine kinase. | Chemotaxis-related protein. | 0.999 |
CVI78689.1 | CVI78698.1 | AWB65_02196 | AWB65_02200 | CheA signal transduction histidine kinase. | Chemotaxis-related protein. | 0.998 |
CVI78689.1 | CVI84192.1 | AWB65_02196 | AWB65_04922 | CheA signal transduction histidine kinase. | Chemotaxis protein CheA. | 0.815 |
CVI78689.1 | CVI84194.1 | AWB65_02196 | AWB65_04923 | CheA signal transduction histidine kinase. | Chemotaxis protein CheW. | 0.997 |
CVI78689.1 | CVI86413.1 | AWB65_02196 | AWB65_06704 | CheA signal transduction histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
CVI78689.1 | cheB-2 | AWB65_02196 | AWB65_02195 | CheA signal transduction histidine kinase. | Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
CVI78689.1 | cheD | AWB65_02196 | AWB65_00566 | CheA signal transduction histidine kinase. | Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.968 |
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