Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI77700.1 | CVI78894.1 | AWB65_01712 | AWB65_02296 | Bcr/CflA subfamily drug resistance transporter. | Major facilitator transporter. | 0.458 |
CVI77700.1 | CVI82435.1 | AWB65_01712 | AWB65_04055 | Bcr/CflA subfamily drug resistance transporter. | Pyochelin synthetase. | 0.452 |
CVI78892.1 | CVI78894.1 | AWB65_02295 | AWB65_02296 | Glycosyl hydrolase catalytic core. | Major facilitator transporter. | 0.442 |
CVI78894.1 | CVI77700.1 | AWB65_02296 | AWB65_01712 | Major facilitator transporter. | Bcr/CflA subfamily drug resistance transporter. | 0.458 |
CVI78894.1 | CVI78892.1 | AWB65_02296 | AWB65_02295 | Major facilitator transporter. | Glycosyl hydrolase catalytic core. | 0.442 |
CVI78894.1 | CVI78896.1 | AWB65_02296 | AWB65_02297 | Major facilitator transporter. | Hypothetical protein. | 0.623 |
CVI78894.1 | CVI80437.1 | AWB65_02296 | AWB65_03054 | Major facilitator transporter. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.448 |
CVI78894.1 | CVI82435.1 | AWB65_02296 | AWB65_04055 | Major facilitator transporter. | Pyochelin synthetase. | 0.479 |
CVI78894.1 | CVI85970.1 | AWB65_02296 | AWB65_06256 | Major facilitator transporter. | Major facilitator transporter. | 0.646 |
CVI78894.1 | ndk | AWB65_02296 | AWB65_01115 | Major facilitator transporter. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.478 |
CVI78896.1 | CVI78894.1 | AWB65_02297 | AWB65_02296 | Hypothetical protein. | Major facilitator transporter. | 0.623 |
CVI80437.1 | CVI78894.1 | AWB65_03054 | AWB65_02296 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Major facilitator transporter. | 0.448 |
CVI80437.1 | CVI82435.1 | AWB65_03054 | AWB65_04055 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pyochelin synthetase. | 0.599 |
CVI80437.1 | ndk | AWB65_03054 | AWB65_01115 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.400 |
CVI82435.1 | CVI77700.1 | AWB65_04055 | AWB65_01712 | Pyochelin synthetase. | Bcr/CflA subfamily drug resistance transporter. | 0.452 |
CVI82435.1 | CVI78894.1 | AWB65_04055 | AWB65_02296 | Pyochelin synthetase. | Major facilitator transporter. | 0.479 |
CVI82435.1 | CVI80437.1 | AWB65_04055 | AWB65_03054 | Pyochelin synthetase. | Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.599 |
CVI82435.1 | CVI85970.1 | AWB65_04055 | AWB65_06256 | Pyochelin synthetase. | Major facilitator transporter. | 0.512 |
CVI82435.1 | ndk | AWB65_04055 | AWB65_01115 | Pyochelin synthetase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.619 |
CVI85970.1 | CVI78894.1 | AWB65_06256 | AWB65_02296 | Major facilitator transporter. | Major facilitator transporter. | 0.646 |
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