Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI79202.1 | CVI79204.1 | AWB65_02466 | AWB65_02467 | Major facilitator transporter. | PF05853 family protein. | 0.454 |
CVI79202.1 | CVI79206.1 | AWB65_02466 | AWB65_02468 | Major facilitator transporter. | Short chain dehydrogenase. | 0.435 |
CVI79204.1 | CVI79202.1 | AWB65_02467 | AWB65_02466 | PF05853 family protein. | Major facilitator transporter. | 0.454 |
CVI79204.1 | CVI79206.1 | AWB65_02467 | AWB65_02468 | PF05853 family protein. | Short chain dehydrogenase. | 0.789 |
CVI79204.1 | CVI79209.1 | AWB65_02467 | AWB65_02469 | PF05853 family protein. | GntR family transcriptional regulator. | 0.641 |
CVI79204.1 | CVI81896.1 | AWB65_02467 | AWB65_03783 | PF05853 family protein. | Cupin. | 0.485 |
CVI79204.1 | CVI82090.1 | AWB65_02467 | AWB65_03886 | PF05853 family protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.466 |
CVI79204.1 | CVI84333.1 | AWB65_02467 | AWB65_04990 | PF05853 family protein. | Thioesterase-like protein. | 0.593 |
CVI79204.1 | CVI85270.1 | AWB65_02467 | AWB65_05556 | PF05853 family protein. | Polyketide cyclase. | 0.423 |
CVI79204.1 | kynB | AWB65_02467 | AWB65_00248 | PF05853 family protein. | Cyclase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. | 0.433 |
CVI79204.1 | lcdH | AWB65_02467 | AWB65_04989 | PF05853 family protein. | 3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | 0.499 |
CVI79206.1 | CVI79202.1 | AWB65_02468 | AWB65_02466 | Short chain dehydrogenase. | Major facilitator transporter. | 0.435 |
CVI79206.1 | CVI79204.1 | AWB65_02468 | AWB65_02467 | Short chain dehydrogenase. | PF05853 family protein. | 0.789 |
CVI79206.1 | CVI79209.1 | AWB65_02468 | AWB65_02469 | Short chain dehydrogenase. | GntR family transcriptional regulator. | 0.703 |
CVI79209.1 | CVI79204.1 | AWB65_02469 | AWB65_02467 | GntR family transcriptional regulator. | PF05853 family protein. | 0.641 |
CVI79209.1 | CVI79206.1 | AWB65_02469 | AWB65_02468 | GntR family transcriptional regulator. | Short chain dehydrogenase. | 0.703 |
CVI81896.1 | CVI79204.1 | AWB65_03783 | AWB65_02467 | Cupin. | PF05853 family protein. | 0.485 |
CVI81896.1 | CVI85270.1 | AWB65_03783 | AWB65_05556 | Cupin. | Polyketide cyclase. | 0.706 |
CVI81896.1 | kynB | AWB65_03783 | AWB65_00248 | Cupin. | Cyclase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. | 0.706 |
CVI82090.1 | CVI79204.1 | AWB65_03886 | AWB65_02467 | 3-hydroxyacyl-CoA dehydrogenase. | PF05853 family protein. | 0.466 |
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