STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA-2Putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (389 aa)    
Predicted Functional Partners:
CVI81195.1
Extracellular solute-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.984
CVI81199.1
Binding-protein-dependent transport system inner membrane protein.
 
  0.983
CVI86117.1
Binding-protein-dependent transport system inner membrane protein.
 
 0.979
CVI81201.1
Putrescine transport system permease.
 
 
 0.975
CVI82002.1
Binding-protein-dependent transport system inner membrane protein.
  
 
  0.892
CVI85981.1
Binding-protein-dependent transport system inner membrane protein.
 
  0.889
CVI78785.1
Binding-protein-dependent transport system inner membrane protein.
 
  0.887
CVI85246.1
ABC spermidine/putrescine transporter, inner membrane subunit.
 
  0.881
CVI80766.1
Binding-protein-dependent transport system inner membrane protein.
 
  0.880
CVI85245.1
ABC spermidine/putrescine transporter, inner membrane subunit.
 
 
 0.877
Your Current Organism:
Caballeronia humi
NCBI taxonomy Id: 326474
Other names: Burkholderia humi, Burkholderia humi Vandamme et al. 2013, Burkholderia sp. LMG 22934, Burkholderia sp. LMG 22935, Burkholderia sp. R-23322, Burkholderia sp. R-23323, Burkholderia sp. R-23328, Burkholderia sp. R-23370, C. humi, CCUG 63059, Caballeronia humi (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22934, LMG:22934, Paraburkholderia humi, Paraburkholderia humi (Vandamme et al. 2013) Sawana et al. 2015, strain RA1-5
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