Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI74997.1 | CVI80637.1 | AWB65_00391 | AWB65_03154 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.781 |
CVI74997.1 | CVI81275.1 | AWB65_00391 | AWB65_03479 | 3-hydroxyacyl-CoA dehydrogenase. | Fatty acid degradation protein. | 0.781 |
CVI74997.1 | CVI82098.1 | AWB65_00391 | AWB65_03890 | 3-hydroxyacyl-CoA dehydrogenase. | Thioesterase-like protein. | 0.710 |
CVI74997.1 | CVI82101.1 | AWB65_00391 | AWB65_03891 | 3-hydroxyacyl-CoA dehydrogenase. | 3-ketoacyl-ACP reductase. | 0.519 |
CVI74997.1 | CVI82432.1 | AWB65_00391 | AWB65_04054 | 3-hydroxyacyl-CoA dehydrogenase. | Beta-ketoacyl synthase. | 0.992 |
CVI74997.1 | CVI82435.1 | AWB65_00391 | AWB65_04055 | 3-hydroxyacyl-CoA dehydrogenase. | Pyochelin synthetase. | 0.906 |
CVI74997.1 | CVI85077.1 | AWB65_00391 | AWB65_05381 | 3-hydroxyacyl-CoA dehydrogenase. | Non-ribosomal peptide synthetase. | 0.717 |
CVI75897.1 | CVI82098.1 | AWB65_00794 | AWB65_03890 | 4-hydroxybenzoate 3-monooxygenase. | Thioesterase-like protein. | 0.688 |
CVI75897.1 | CVI82432.1 | AWB65_00794 | AWB65_04054 | 4-hydroxybenzoate 3-monooxygenase. | Beta-ketoacyl synthase. | 0.826 |
CVI75897.1 | CVI82435.1 | AWB65_00794 | AWB65_04055 | 4-hydroxybenzoate 3-monooxygenase. | Pyochelin synthetase. | 0.569 |
CVI75897.1 | CVI85077.1 | AWB65_00794 | AWB65_05381 | 4-hydroxybenzoate 3-monooxygenase. | Non-ribosomal peptide synthetase. | 0.835 |
CVI75897.1 | ubiA | AWB65_00794 | AWB65_00324 | 4-hydroxybenzoate 3-monooxygenase. | 4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.641 |
CVI80637.1 | CVI74997.1 | AWB65_03154 | AWB65_00391 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.781 |
CVI80637.1 | CVI81275.1 | AWB65_03154 | AWB65_03479 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid degradation protein. | 0.796 |
CVI80637.1 | CVI82098.1 | AWB65_03154 | AWB65_03890 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Thioesterase-like protein. | 0.710 |
CVI80637.1 | CVI82101.1 | AWB65_03154 | AWB65_03891 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-ketoacyl-ACP reductase. | 0.519 |
CVI80637.1 | CVI82432.1 | AWB65_03154 | AWB65_04054 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Beta-ketoacyl synthase. | 0.992 |
CVI80637.1 | CVI82435.1 | AWB65_03154 | AWB65_04055 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Pyochelin synthetase. | 0.906 |
CVI80637.1 | CVI85077.1 | AWB65_03154 | AWB65_05381 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Non-ribosomal peptide synthetase. | 0.717 |
CVI81275.1 | CVI74997.1 | AWB65_03479 | AWB65_00391 | Fatty acid degradation protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.781 |
page 1 of 4