STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI82347.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
CVI75150.1
Phosphotransferase system, IIBC component.
   
 
 0.845
CVI85801.1
PTS system N-acetylglucosamine-specific transporter subunit IIBC.
   
 
 0.845
CVI75152.1
Multiphosphoryl transfer protein.
    
 0.842
CVI85802.1
Multiphosphoryl transfer protein.
    
 0.842
CVI82349.1
Hypothetical protein.
       0.737
CVI78424.1
Hypothetical protein.
  
     0.642
CVI80115.1
Hypothetical protein.
  
 
 0.638
CVI85169.1
Hypothetical protein.
  
 
 0.638
CVI85395.1
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.638
CVI78476.1
Hypothetical protein.
  
     0.616
Your Current Organism:
Caballeronia humi
NCBI taxonomy Id: 326474
Other names: Burkholderia humi, Burkholderia humi Vandamme et al. 2013, Burkholderia sp. LMG 22934, Burkholderia sp. LMG 22935, Burkholderia sp. R-23322, Burkholderia sp. R-23323, Burkholderia sp. R-23328, Burkholderia sp. R-23370, C. humi, CCUG 63059, Caballeronia humi (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22934, LMG:22934, Paraburkholderia humi, Paraburkholderia humi (Vandamme et al. 2013) Sawana et al. 2015, strain RA1-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.