Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI74812.1 | CVI79918.1 | AWB65_00298 | AWB65_02804 | Anthranilate synthase component I/chorismate-binding protein. | Chorismate mutase. | 0.929 |
CVI74812.1 | CVI82432.1 | AWB65_00298 | AWB65_04054 | Anthranilate synthase component I/chorismate-binding protein. | Beta-ketoacyl synthase. | 0.896 |
CVI74812.1 | CVI82435.1 | AWB65_00298 | AWB65_04055 | Anthranilate synthase component I/chorismate-binding protein. | Pyochelin synthetase. | 0.936 |
CVI74812.1 | CVI83397.1 | AWB65_00298 | AWB65_04520 | Anthranilate synthase component I/chorismate-binding protein. | MFS transporter. | 0.535 |
CVI75465.1 | CVI83397.1 | AWB65_00590 | AWB65_04520 | Glyoxalase. | MFS transporter. | 0.433 |
CVI77231.1 | CVI82435.1 | AWB65_01497 | AWB65_04055 | MFS transporter. | Pyochelin synthetase. | 0.412 |
CVI77231.1 | CVI83397.1 | AWB65_01497 | AWB65_04520 | MFS transporter. | MFS transporter. | 0.423 |
CVI78760.1 | CVI83397.1 | AWB65_02231 | AWB65_04520 | Membrane protein. | MFS transporter. | 0.507 |
CVI79177.1 | CVI83397.1 | AWB65_02454 | AWB65_04520 | Multidrug DMT transporter permease. | MFS transporter. | 0.425 |
CVI79918.1 | CVI74812.1 | AWB65_02804 | AWB65_00298 | Chorismate mutase. | Anthranilate synthase component I/chorismate-binding protein. | 0.929 |
CVI79918.1 | CVI82432.1 | AWB65_02804 | AWB65_04054 | Chorismate mutase. | Beta-ketoacyl synthase. | 0.844 |
CVI79918.1 | CVI82435.1 | AWB65_02804 | AWB65_04055 | Chorismate mutase. | Pyochelin synthetase. | 0.681 |
CVI79918.1 | CVI83397.1 | AWB65_02804 | AWB65_04520 | Chorismate mutase. | MFS transporter. | 0.543 |
CVI82432.1 | CVI74812.1 | AWB65_04054 | AWB65_00298 | Beta-ketoacyl synthase. | Anthranilate synthase component I/chorismate-binding protein. | 0.896 |
CVI82432.1 | CVI79918.1 | AWB65_04054 | AWB65_02804 | Beta-ketoacyl synthase. | Chorismate mutase. | 0.844 |
CVI82432.1 | CVI82435.1 | AWB65_04054 | AWB65_04055 | Beta-ketoacyl synthase. | Pyochelin synthetase. | 0.999 |
CVI82432.1 | CVI83397.1 | AWB65_04054 | AWB65_04520 | Beta-ketoacyl synthase. | MFS transporter. | 0.453 |
CVI82435.1 | CVI74812.1 | AWB65_04055 | AWB65_00298 | Pyochelin synthetase. | Anthranilate synthase component I/chorismate-binding protein. | 0.936 |
CVI82435.1 | CVI77231.1 | AWB65_04055 | AWB65_01497 | Pyochelin synthetase. | MFS transporter. | 0.412 |
CVI82435.1 | CVI79918.1 | AWB65_04055 | AWB65_02804 | Pyochelin synthetase. | Chorismate mutase. | 0.681 |
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