Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI74941.1 | CVI82432.1 | AWB65_00363 | AWB65_04054 | XRE family transcriptional regulator. | Beta-ketoacyl synthase. | 0.630 |
CVI74941.1 | CVI83399.1 | AWB65_00363 | AWB65_04521 | XRE family transcriptional regulator. | Cupin 2 domain-containing protein. | 0.620 |
CVI74941.1 | CVI84242.1 | AWB65_00363 | AWB65_04947 | XRE family transcriptional regulator. | Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.676 |
CVI74941.1 | metG | AWB65_00363 | AWB65_00119 | XRE family transcriptional regulator. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.661 |
CVI77461.1 | CVI78966.1 | AWB65_01591 | AWB65_02353 | NmrA family protein. | Hydrolase. | 0.635 |
CVI77461.1 | CVI82432.1 | AWB65_01591 | AWB65_04054 | NmrA family protein. | Beta-ketoacyl synthase. | 0.990 |
CVI77461.1 | CVI83399.1 | AWB65_01591 | AWB65_04521 | NmrA family protein. | Cupin 2 domain-containing protein. | 0.609 |
CVI77461.1 | CVI85838.1 | AWB65_01591 | AWB65_06124 | NmrA family protein. | Alpha/beta hydrolase. | 0.640 |
CVI78966.1 | CVI77461.1 | AWB65_02353 | AWB65_01591 | Hydrolase. | NmrA family protein. | 0.635 |
CVI78966.1 | CVI79008.1 | AWB65_02353 | AWB65_02373 | Hydrolase. | NmrA family transcriptional regulator. | 0.621 |
CVI78966.1 | CVI79055.1 | AWB65_02353 | AWB65_02395 | Hydrolase. | Metal dependent phosphohydrolase. | 0.651 |
CVI78966.1 | CVI82432.1 | AWB65_02353 | AWB65_04054 | Hydrolase. | Beta-ketoacyl synthase. | 0.951 |
CVI78966.1 | CVI83399.1 | AWB65_02353 | AWB65_04521 | Hydrolase. | Cupin 2 domain-containing protein. | 0.604 |
CVI79008.1 | CVI78966.1 | AWB65_02373 | AWB65_02353 | NmrA family transcriptional regulator. | Hydrolase. | 0.621 |
CVI79008.1 | CVI79055.1 | AWB65_02373 | AWB65_02395 | NmrA family transcriptional regulator. | Metal dependent phosphohydrolase. | 0.423 |
CVI79008.1 | CVI82432.1 | AWB65_02373 | AWB65_04054 | NmrA family transcriptional regulator. | Beta-ketoacyl synthase. | 0.990 |
CVI79008.1 | CVI83399.1 | AWB65_02373 | AWB65_04521 | NmrA family transcriptional regulator. | Cupin 2 domain-containing protein. | 0.647 |
CVI79008.1 | CVI85838.1 | AWB65_02373 | AWB65_06124 | NmrA family transcriptional regulator. | Alpha/beta hydrolase. | 0.632 |
CVI79055.1 | CVI78966.1 | AWB65_02395 | AWB65_02353 | Metal dependent phosphohydrolase. | Hydrolase. | 0.651 |
CVI79055.1 | CVI79008.1 | AWB65_02395 | AWB65_02373 | Metal dependent phosphohydrolase. | NmrA family transcriptional regulator. | 0.423 |
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