STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CVI83416.1Nitrite/sulfite reductase hemoprotein beta subunit. (592 aa)    
Predicted Functional Partners:
CVI74528.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
 
 0.992
CVI85584.1
Nitrate reductase/sulfite reductase flavoprotein alpha-component.
  
 0.990
CVI83417.1
Oxidoreductase.
 
 
 0.988
CVI74530.1
Oxidoreductase.
 
 
 0.957
CVI74526.1
Sulfate adenylyltransferase subunit 2.
 
 
 0.941
CVI74524.1
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
 
 0.908
CVI81633.1
Glutamate synthase.
   
 
 0.908
CVI79892.1
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.904
CVI76044.1
precorrin-6Y C5,15-methyltransferase.
  
 
 0.896
CVI76036.1
Precorrin-3 methyltransferase.
  
 
 0.866
Your Current Organism:
Caballeronia humi
NCBI taxonomy Id: 326474
Other names: Burkholderia humi, Burkholderia humi Vandamme et al. 2013, Burkholderia sp. LMG 22934, Burkholderia sp. LMG 22935, Burkholderia sp. R-23322, Burkholderia sp. R-23323, Burkholderia sp. R-23328, Burkholderia sp. R-23370, C. humi, CCUG 63059, Caballeronia humi (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22934, LMG:22934, Paraburkholderia humi, Paraburkholderia humi (Vandamme et al. 2013) Sawana et al. 2015, strain RA1-5
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