Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI75146.1 | CVI86093.1 | AWB65_00467 | AWB65_06379 | Deacylase; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | Hypothetical protein. | 0.572 |
CVI75821.1 | CVI78835.1 | AWB65_00756 | AWB65_02267 | NAD-dependent epimerase/dehydratase. | ATP-dependent OLD family endonuclease. | 0.837 |
CVI75821.1 | CVI86093.1 | AWB65_00756 | AWB65_06379 | NAD-dependent epimerase/dehydratase. | Hypothetical protein. | 0.705 |
CVI78835.1 | CVI75821.1 | AWB65_02267 | AWB65_00756 | ATP-dependent OLD family endonuclease. | NAD-dependent epimerase/dehydratase. | 0.837 |
CVI78835.1 | CVI86093.1 | AWB65_02267 | AWB65_06379 | ATP-dependent OLD family endonuclease. | Hypothetical protein. | 0.861 |
CVI83130.1 | CVI86093.1 | AWB65_04403 | AWB65_06379 | Hypothetical protein. | Hypothetical protein. | 0.572 |
CVI85054.1 | CVI86093.1 | AWB65_05365 | AWB65_06379 | Transcriptional regulator-like protein. | Hypothetical protein. | 0.673 |
CVI85054.1 | recG | AWB65_05365 | AWB65_00329 | Transcriptional regulator-like protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.667 |
CVI85649.1 | CVI86093.1 | AWB65_05935 | AWB65_06379 | Filamentation induced by cAMP protein, Fic. | Hypothetical protein. | 0.475 |
CVI86093.1 | CVI75146.1 | AWB65_06379 | AWB65_00467 | Hypothetical protein. | Deacylase; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. | 0.572 |
CVI86093.1 | CVI75821.1 | AWB65_06379 | AWB65_00756 | Hypothetical protein. | NAD-dependent epimerase/dehydratase. | 0.705 |
CVI86093.1 | CVI78835.1 | AWB65_06379 | AWB65_02267 | Hypothetical protein. | ATP-dependent OLD family endonuclease. | 0.861 |
CVI86093.1 | CVI83130.1 | AWB65_06379 | AWB65_04403 | Hypothetical protein. | Hypothetical protein. | 0.572 |
CVI86093.1 | CVI85054.1 | AWB65_06379 | AWB65_05365 | Hypothetical protein. | Transcriptional regulator-like protein. | 0.673 |
CVI86093.1 | CVI85649.1 | AWB65_06379 | AWB65_05935 | Hypothetical protein. | Filamentation induced by cAMP protein, Fic. | 0.475 |
CVI86093.1 | CVI86403.1 | AWB65_06379 | AWB65_06694 | Hypothetical protein. | Hypothetical protein. | 0.572 |
CVI86093.1 | recG | AWB65_06379 | AWB65_00329 | Hypothetical protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.637 |
CVI86403.1 | CVI86093.1 | AWB65_06694 | AWB65_06379 | Hypothetical protein. | Hypothetical protein. | 0.572 |
recG | CVI85054.1 | AWB65_00329 | AWB65_05365 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | Transcriptional regulator-like protein. | 0.667 |
recG | CVI86093.1 | AWB65_00329 | AWB65_06379 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | Hypothetical protein. | 0.637 |