Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI74781.1 | CVI76868.1 | AWB65_00285 | AWB65_01314 | Lipoprotein. | Outer membrane porin protein. | 0.755 |
CVI74781.1 | CVI80378.1 | AWB65_00285 | AWB65_03035 | Lipoprotein. | Outer membrane protein (porin)-like protein. | 0.679 |
CVI74781.1 | CVI86487.1 | AWB65_00285 | AWB65_06783 | Lipoprotein. | Cobalamin biosynthesis protein CobT. | 0.419 |
CVI74781.1 | CVI86586.1 | AWB65_00285 | AWB65_06882 | Lipoprotein. | Sodium:proline symporter. | 0.477 |
CVI76868.1 | CVI74781.1 | AWB65_01314 | AWB65_00285 | Outer membrane porin protein. | Lipoprotein. | 0.755 |
CVI76868.1 | CVI80378.1 | AWB65_01314 | AWB65_03035 | Outer membrane porin protein. | Outer membrane protein (porin)-like protein. | 0.655 |
CVI76868.1 | CVI86487.1 | AWB65_01314 | AWB65_06783 | Outer membrane porin protein. | Cobalamin biosynthesis protein CobT. | 0.409 |
CVI76868.1 | CVI86586.1 | AWB65_01314 | AWB65_06882 | Outer membrane porin protein. | Sodium:proline symporter. | 0.526 |
CVI78329.1 | CVI86586.1 | AWB65_02030 | AWB65_06882 | Hypothetical protein. | Sodium:proline symporter. | 0.536 |
CVI80378.1 | CVI74781.1 | AWB65_03035 | AWB65_00285 | Outer membrane protein (porin)-like protein. | Lipoprotein. | 0.679 |
CVI80378.1 | CVI76868.1 | AWB65_03035 | AWB65_01314 | Outer membrane protein (porin)-like protein. | Outer membrane porin protein. | 0.655 |
CVI80378.1 | CVI86279.1 | AWB65_03035 | AWB65_06565 | Outer membrane protein (porin)-like protein. | Plasmid replication protein. | 0.421 |
CVI80378.1 | CVI86487.1 | AWB65_03035 | AWB65_06783 | Outer membrane protein (porin)-like protein. | Cobalamin biosynthesis protein CobT. | 0.458 |
CVI80378.1 | CVI86586.1 | AWB65_03035 | AWB65_06882 | Outer membrane protein (porin)-like protein. | Sodium:proline symporter. | 0.690 |
CVI86279.1 | CVI80378.1 | AWB65_06565 | AWB65_03035 | Plasmid replication protein. | Outer membrane protein (porin)-like protein. | 0.421 |
CVI86279.1 | CVI86280.1 | AWB65_06565 | AWB65_06566 | Plasmid replication protein. | Plasmid replication protein. | 0.974 |
CVI86279.1 | CVI86586.1 | AWB65_06565 | AWB65_06882 | Plasmid replication protein. | Sodium:proline symporter. | 0.549 |
CVI86280.1 | CVI86279.1 | AWB65_06566 | AWB65_06565 | Plasmid replication protein. | Plasmid replication protein. | 0.974 |
CVI86280.1 | CVI86586.1 | AWB65_06566 | AWB65_06882 | Plasmid replication protein. | Sodium:proline symporter. | 0.498 |
CVI86487.1 | CVI74781.1 | AWB65_06783 | AWB65_00285 | Cobalamin biosynthesis protein CobT. | Lipoprotein. | 0.419 |
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