Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CVJ04004.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
CVJ35411.1
Lipoprotein.
  
     0.773
CVJ61141.1
Hypothetical protein.
  
     0.772
CVJ37752.1
Lipoprotein.
  
     0.771
CVJ44782.1
Lipoprotein.
  
     0.770
CVJ65914.1
ATP synthase I AtpI.
  
     0.770
CVJ41258.1
Membrane protein.
  
     0.768
CVJ61216.1
O-antigen polymerase family protein.
  
     0.767
CVJ37942.1
Membrane protein.
  
     0.763
CVJ35958.1
FtsZ-binding protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.760
CVJ04438.1
Lipoprotein.
  
     0.759
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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