Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CVJ19750.1Membrane protein. (261 aa)    
Predicted Functional Partners:
CVJ19736.1
ABC transporter permease.
 
 
 
 0.973
CVJ19715.1
ABC-transporter ATP binding protein.
 
 
 
 0.929
CVJ12018.1
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
    
 
 0.781
CVJ19772.1
Hypothetical protein.
       0.775
CVJ45225.1
N-acetylmuramoyl-L-alanine amidase.
  
 
   0.735
CVJ55781.1
ABC transporter-like protein.
   
 
 0.690
CVJ00392.1
Membrane protein SmpA.
  
 
 0.666
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
   
 
 0.658
CVJ23774.1
ABC transporter ATP-binding protein.
   
 
 0.658
CVI99583.1
Lipoprotein releasing system transmembrane protein.
   
 
 0.656
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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