STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ26034.1Major facilitator transporter. (500 aa)    
Predicted Functional Partners:
CVJ75747.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.523
CVJ03639.1
Bcr/CflA subfamily drug resistance transporter.
  
     0.451
CVJ15493.1
Bcr/CflA subfamily drug resistance transporter.
  
     0.446
CVJ26023.1
Histidine kinase.
       0.442
CVJ26052.1
HlyD family secretion protein.
       0.418
CVJ26064.1
ABC transporter.
       0.418
CVJ26083.1
ABC-2 type transporter.
       0.415
CVJ26095.1
RND efflux system outer membrane lipoprotein.
       0.406
CVJ26107.1
TetR family transcriptional regulator.
       0.406
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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