STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ36987.1Membrane protein. (224 aa)    
Predicted Functional Partners:
CVJ49736.1
TPR repeat-containing protein.
  
     0.756
CVJ17931.1
Response regulator receiver protein.
  
     0.743
CVJ61216.1
O-antigen polymerase family protein.
  
     0.721
CVJ49123.1
PRC-barrel domain-containing protein.
  
     0.714
CVJ00723.1
Lipoprotein.
  
     0.692
CVJ60340.1
EAL domain-containing protein.
  
     0.692
CVJ65182.1
General secretion pathway protein H.
  
     0.685
CVJ65155.1
General secretory pathway protein J.
  
     0.671
CVJ49490.1
Membrane protein.
  
     0.651
CVJ49723.1
Phage shock protein A, PspA.
  
     0.648
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.