STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ60905.1DNA-binding response regulator. (220 aa)    
Predicted Functional Partners:
CVJ60891.1
Sensor histidine kinase.
 
 0.985
CVK03051.1
PAS/PAC sensor hybrid histidine kinase.
 
0.967
CVK05635.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.960
CVK07805.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.960
CVI95331.1
Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.953
CVJ58608.1
Signal transduction histidine kinase with CheB and CheR activity.
  
 0.953
CVJ80027.1
Sensor protein evgS.
 
0.952
CVI87231.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.939
CVI87600.1
Sensor kinase.
 
 0.937
CVJ29805.1
Sensor kinase/response regulator fusion protein.
  
 0.933
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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