Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVJ15255.1 | CVJ47083.1 | AWB66_01290 | AWB66_02913 | DotU family type IV/VI secretion system protein. | OmpA/MotB family outer membrane protein. | 0.701 |
CVJ15255.1 | CVJ70145.1 | AWB66_01290 | AWB66_04087 | DotU family type IV/VI secretion system protein. | Membrane protein. | 0.797 |
CVJ15255.1 | guaA | AWB66_01290 | AWB66_03107 | DotU family type IV/VI secretion system protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.678 |
CVJ35704.1 | CVJ70145.1 | AWB66_02328 | AWB66_04087 | Outer membrane chaperone Skp; Belongs to the skp family. | Membrane protein. | 0.746 |
CVJ35704.1 | lolA | AWB66_02328 | AWB66_02683 | Outer membrane chaperone Skp; Belongs to the skp family. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.420 |
CVJ47083.1 | CVJ15255.1 | AWB66_02913 | AWB66_01290 | OmpA/MotB family outer membrane protein. | DotU family type IV/VI secretion system protein. | 0.701 |
CVJ47083.1 | CVJ70145.1 | AWB66_02913 | AWB66_04087 | OmpA/MotB family outer membrane protein. | Membrane protein. | 0.797 |
CVJ47083.1 | guaA | AWB66_02913 | AWB66_03107 | OmpA/MotB family outer membrane protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.678 |
CVJ56632.1 | CVJ70145.1 | AWB66_03422 | AWB66_04087 | Cytochrome c, class I. | Membrane protein. | 0.577 |
CVJ56632.1 | CVJ88887.1 | AWB66_03422 | AWB66_05094 | Cytochrome c, class I. | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
CVJ56632.1 | CVJ88901.1 | AWB66_03422 | AWB66_05095 | Cytochrome c, class I. | Cytochrome c oxidase subunit I. | 0.999 |
CVJ56632.1 | guaA | AWB66_03422 | AWB66_03107 | Cytochrome c, class I. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.450 |
CVJ70145.1 | CVJ15255.1 | AWB66_04087 | AWB66_01290 | Membrane protein. | DotU family type IV/VI secretion system protein. | 0.797 |
CVJ70145.1 | CVJ35704.1 | AWB66_04087 | AWB66_02328 | Membrane protein. | Outer membrane chaperone Skp; Belongs to the skp family. | 0.746 |
CVJ70145.1 | CVJ47083.1 | AWB66_04087 | AWB66_02913 | Membrane protein. | OmpA/MotB family outer membrane protein. | 0.797 |
CVJ70145.1 | CVJ56632.1 | AWB66_04087 | AWB66_03422 | Membrane protein. | Cytochrome c, class I. | 0.577 |
CVJ70145.1 | CVJ88887.1 | AWB66_04087 | AWB66_05094 | Membrane protein. | Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.638 |
CVJ70145.1 | CVJ88901.1 | AWB66_04087 | AWB66_05095 | Membrane protein. | Cytochrome c oxidase subunit I. | 0.638 |
CVJ70145.1 | CVK06010.1 | AWB66_04087 | AWB66_06336 | Membrane protein. | Cell wall surface anchor family protein. | 0.794 |
CVJ70145.1 | guaA | AWB66_04087 | AWB66_03107 | Membrane protein. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.711 |
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