STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ77853.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
CVJ77870.1
Peptidase.
 
     0.749
CVJ56950.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.746
CVJ78472.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.738
CVJ78671.1
LysR family transcriptional regulator.
  
     0.738
CVI87991.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.731
CVI92922.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.731
CVJ52551.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.712
CVJ53240.1
LysR family transcriptional regulator.
  
     0.712
CVK04856.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.709
CVJ96092.1
LysR family transcriptional regulator.
  
     0.704
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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