Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CVJ78349.1Arogenate dehydrogenase. (231 aa)    
Predicted Functional Partners:
CVJ80452.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.548
CVJ16962.1
Methylmalonate-semialdehyde dehydrogenase.
     
  0.505
CVJ71893.1
Methylmalonate-semialdehyde dehydrogenase.
     
  0.505
CVJ78364.1
ABC transporter-like protein.
       0.458
CVJ78378.1
Hypothetical protein.
       0.458
CVJ79820.1
Glyoxalase-like domain protein.
  
     0.432
CVJ49504.1
3-hydroxyisobutyryl-CoA hydrolase.
     
  0.428
CVJ80901.1
enoyl-CoA hydratase/isomerase.
     
  0.428
CVJ49780.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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