Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CVJ79181.1Aminotransferase, class V. (406 aa)    
Predicted Functional Partners:
CVJ79195.1
D-lactate dehydrogenase (cytochrome).
 
 
 0.960
CVJ04291.1
Phosphonopyruvate decarboxylase.
  
 
 0.853
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
 
 0.834
CVJ77975.1
D-lactate dehydrogenase (cytochrome).
 
 
 0.833
CVJ95382.1
Dehydrogenase, FMN-dependent.
  
 0.770
CVJ63236.1
Malic enzyme; Belongs to the malic enzymes family.
  
 
 0.742
CVJ75858.1
Malic enzyme.
  
 
 0.742
CVK04896.1
Dehydrogenase.
   
 0.737
CVJ90488.1
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.711
CVI89663.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.704
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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