STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ93269.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (322 aa)    
Predicted Functional Partners:
CVK06689.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.754
CVJ30778.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.750
CVK04856.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.750
CVI87023.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.748
CVJ95746.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.730
CVJ09809.1
DNA-binding transcriptional activator GcvA; Belongs to the LysR transcriptional regulatory family.
  
     0.714
CVK03023.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.696
CVJ01145.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.678
CVK02732.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.629
CVJ89545.1
DNA-binding transcriptional activator GcvA; Belongs to the LysR transcriptional regulatory family.
  
     0.496
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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