Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI88179.1 | CVK01605.1 | AWB66_00127 | AWB66_05962 | ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family. | Peptidase M48, Ste24p. | 0.502 |
CVI88179.1 | grpE | AWB66_00127 | AWB66_05268 | ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.647 |
CVJ00108.1 | CVJ64720.1 | AWB66_00690 | AWB66_03824 | Hypothetical protein. | Flagellar motor switch protein FliM. | 0.833 |
CVJ00108.1 | CVK01605.1 | AWB66_00690 | AWB66_05962 | Hypothetical protein. | Peptidase M48, Ste24p. | 0.503 |
CVJ06230.1 | CVK01605.1 | AWB66_00959 | AWB66_05962 | Hypothetical protein. | Peptidase M48, Ste24p. | 0.787 |
CVJ06230.1 | der | AWB66_00959 | AWB66_00958 | Hypothetical protein. | GTPase Der. | 0.835 |
CVJ50583.1 | CVK01605.1 | AWB66_03128 | AWB66_05962 | Membrane protein; Belongs to the BI1 family. | Peptidase M48, Ste24p. | 0.451 |
CVJ64720.1 | CVJ00108.1 | AWB66_03824 | AWB66_00690 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.833 |
CVJ64720.1 | CVK01605.1 | AWB66_03824 | AWB66_05962 | Flagellar motor switch protein FliM. | Peptidase M48, Ste24p. | 0.753 |
CVK01605.1 | CVI88179.1 | AWB66_05962 | AWB66_00127 | Peptidase M48, Ste24p. | ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family. | 0.502 |
CVK01605.1 | CVJ00108.1 | AWB66_05962 | AWB66_00690 | Peptidase M48, Ste24p. | Hypothetical protein. | 0.503 |
CVK01605.1 | CVJ06230.1 | AWB66_05962 | AWB66_00959 | Peptidase M48, Ste24p. | Hypothetical protein. | 0.787 |
CVK01605.1 | CVJ50583.1 | AWB66_05962 | AWB66_03128 | Peptidase M48, Ste24p. | Membrane protein; Belongs to the BI1 family. | 0.451 |
CVK01605.1 | CVJ64720.1 | AWB66_05962 | AWB66_03824 | Peptidase M48, Ste24p. | Flagellar motor switch protein FliM. | 0.753 |
CVK01605.1 | CVK01615.1 | AWB66_05962 | AWB66_05963 | Peptidase M48, Ste24p. | Malonyl CoA-acyl carrier protein transacylase. | 0.493 |
CVK01605.1 | der | AWB66_05962 | AWB66_00958 | Peptidase M48, Ste24p. | GTPase Der. | 0.787 |
CVK01605.1 | ftsH | AWB66_05962 | AWB66_02522 | Peptidase M48, Ste24p. | ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.502 |
CVK01605.1 | grpE | AWB66_05962 | AWB66_05268 | Peptidase M48, Ste24p. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.583 |
CVK01605.1 | mdcG | AWB66_05962 | AWB66_05964 | Peptidase M48, Ste24p. | Phosphoribosyl-dephospho-CoA transferase. | 0.432 |
CVK01615.1 | CVK01605.1 | AWB66_05963 | AWB66_05962 | Malonyl CoA-acyl carrier protein transacylase. | Peptidase M48, Ste24p. | 0.493 |
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