STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVK03631.1Crp/FNR family transcriptional regulator. (239 aa)    
Predicted Functional Partners:
CVJ27893.1
Periplasmic sensor signal transduction histidine kinase.
   
 0.916
CVJ82204.1
Glutamate synthase.
    
 0.894
CVK05338.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase.
  
 0.861
CVJ29805.1
Sensor kinase/response regulator fusion protein.
   
 0.820
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.816
CVI90455.1
Multi-sensor hybrid histidine kinase.
   
 0.814
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.805
CVJ80027.1
Sensor protein evgS.
   
 0.804
CVJ85566.1
Adenylate/guanylate cyclase.
  
 0.800
CVK05727.1
Adenylate/guanylate cyclase.
  
 0.800
Your Current Organism:
Caballeronia telluris
NCBI taxonomy Id: 326475
Other names: Burkholderia sp. LMG 22936, Burkholderia sp. LMG 27136, Burkholderia telluris, Burkholderia telluris Vandamme et al. 2013, C. telluris, CCUG 63060, Caballeronia telluris (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 22936, LMG:22936, Paraburkholderia telluris, strain A57-4, strain R-23326
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