STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSI11204.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (62 aa)    
Predicted Functional Partners:
OSI10655.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
OSI09610.1
S-adenosyl-L-methionine-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
OSI10178.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
OSI09725.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
OSI10262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
YrbA_1
BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.
  
     0.525
OSI10507.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
lapB
Lipopolysaccharide assembly protein LapB; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.
 
     0.521
Nqo3
NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
     0.476
OSI10624.1
SCP2 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
Your Current Organism:
Neisseria zoodegmatis
NCBI taxonomy Id: 326523
Other names: ATCC 29859, CDC D5986, DSM 21643, LMG 23012, LMG:23012, N. zoodegmatis, NCTC 12230, Neisseria sp. EF-4b, Neisseria sp. R-24681, Neisseria zoodegmatis Vandamme et al. 2006, strain CL 194/78
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