STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002104515_00902Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_002104515_00273
Unannotated protein.
 
 
  0.900
GCA_002104515_00869
Unannotated protein.
 0.837
GCA_002104515_00272
Unannotated protein.
 
 0.806
GCA_002104515_01496
Unannotated protein.
 
  0.806
GCA_002104515_03565
Unannotated protein.
 
  0.797
GCA_002104515_01573
Unannotated protein.
  
 
  0.785
GCA_002104515_01162
Unannotated protein.
  
  0.783
GCA_002104515_01498
Unannotated protein.
  
 
  0.771
GCA_002104515_00424
Unannotated protein.
  
 
  0.769
GCA_002104515_02420
Unannotated protein.
  
 
  0.745
Your Current Organism:
Colwellia polaris
NCBI taxonomy Id: 326537
Other names: Arctic sea ice bacterium BSi20537, C. polaris, CGMCC 1.6132, Colwellia polaris Zhang et al. 2008, JCM 13952, MCCC 1C00015, strain 537
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.