STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002104515_01107Unannotated protein. (720 aa)    
Predicted Functional Partners:
GCA_002104515_01108
Unannotated protein.
 
     0.836
GCA_002104515_01106
Unannotated protein.
 
     0.818
GCA_002104515_02589
Unannotated protein.
  
 
  0.792
GCA_002104515_02588
Unannotated protein.
  
 
  0.783
GCA_002104515_00446
Unannotated protein.
  
 
  0.764
GCA_002104515_01757
Unannotated protein.
  
 
  0.760
GCA_002104515_01723
Unannotated protein.
  
 
  0.758
GCA_002104515_02265
Unannotated protein.
  
 
  0.758
GCA_002104515_00215
Unannotated protein.
  
     0.742
GCA_002104515_01269
Unannotated protein.
    
  0.727
Your Current Organism:
Colwellia polaris
NCBI taxonomy Id: 326537
Other names: Arctic sea ice bacterium BSi20537, C. polaris, CGMCC 1.6132, Colwellia polaris Zhang et al. 2008, JCM 13952, MCCC 1C00015, strain 537
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.