STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002104515_03107Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_002104515_03326
Unannotated protein.
  
 0.994
GCA_002104515_02455
Unannotated protein.
   
 
 0.958
GCA_002104515_03062
Unannotated protein.
    
 0.954
GCA_002104515_03052
Unannotated protein.
   
 
 0.953
GCA_002104515_03744
Unannotated protein.
  
 
  0.948
GCA_002104515_03047
Unannotated protein.
  
 0.947
GCA_002104515_03331
Unannotated protein.
     
 0.943
GCA_002104515_01449
Unannotated protein.
  
 
  0.941
GCA_002104515_00872
Unannotated protein.
    
  0.940
GCA_002104515_03748
Unannotated protein.
    
  0.938
Your Current Organism:
Colwellia polaris
NCBI taxonomy Id: 326537
Other names: Arctic sea ice bacterium BSi20537, C. polaris, CGMCC 1.6132, Colwellia polaris Zhang et al. 2008, JCM 13952, MCCC 1C00015, strain 537
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.