STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002104515_03703Unannotated protein. (71 aa)    
Predicted Functional Partners:
GCA_002104515_00331
Unannotated protein.
   
 
 0.696
GCA_002104515_03832
Unannotated protein.
    
  0.682
GCA_002104515_01936
Unannotated protein.
  
 
 0.644
GCA_002104515_01932
Unannotated protein.
  
 
 0.635
GCA_002104515_02848
Unannotated protein.
  
 
 0.635
GCA_002104515_00735
Unannotated protein.
    
  0.618
GCA_002104515_00845
Unannotated protein.
    
  0.593
GCA_002104515_01933
Unannotated protein.
    
 0.584
GCA_002104515_01227
Unannotated protein.
    
  0.583
GCA_002104515_00206
Unannotated protein.
    
  0.582
Your Current Organism:
Colwellia polaris
NCBI taxonomy Id: 326537
Other names: Arctic sea ice bacterium BSi20537, C. polaris, CGMCC 1.6132, Colwellia polaris Zhang et al. 2008, JCM 13952, MCCC 1C00015, strain 537
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.