STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975095_01345Unannotated protein. (339 aa)    
Predicted Functional Partners:
GCA_000975095_01346
Unannotated protein.
 
 0.999
GCA_000975095_00369
Unannotated protein.
 
 
 0.948
GCA_000975095_01344
Unannotated protein.
       0.701
GCA_000975095_00347
Unannotated protein.
  
  
 0.672
GCA_000975095_01350
Unannotated protein.
 
  
 0.652
GCA_000975095_01370
Unannotated protein.
      
 0.623
GCA_000975095_02562
Unannotated protein.
     
 0.622
GCA_000975095_00506
Unannotated protein.
 
      0.596
GCA_000975095_01331
Unannotated protein.
  
 
 0.589
GCA_000975095_01347
Unannotated protein.
       0.572
Your Current Organism:
Demequina aestuarii
NCBI taxonomy Id: 327095
Other names: D. aestuarii, Demequina aestuarii Yi et al. 2007, IMSNU 14027, JCM 12123, KCTC 9919, Micrococcineae bacterium JC2054, strain JC2054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.