STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975095_02058Unannotated protein. (435 aa)    
Predicted Functional Partners:
GCA_000975095_02059
Unannotated protein.
 
 0.999
GCA_000975095_02060
Unannotated protein.
 
  
 0.993
GCA_000975095_02057
Unannotated protein.
 
  
 0.972
GCA_000975095_02061
Unannotated protein.
 
  
 0.957
GCA_000975095_01215
Unannotated protein.
   
 0.940
GCA_000975095_02054
Unannotated protein.
 
     0.921
GCA_000975095_02055
Unannotated protein.
 
     0.908
GCA_000975095_02056
Unannotated protein.
 
     0.857
GCA_000975095_00571
Unannotated protein.
   
 0.850
GCA_000975095_00570
Unannotated protein.
   
 
 0.774
Your Current Organism:
Demequina aestuarii
NCBI taxonomy Id: 327095
Other names: D. aestuarii, Demequina aestuarii Yi et al. 2007, IMSNU 14027, JCM 12123, KCTC 9919, Micrococcineae bacterium JC2054, strain JC2054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.