Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGM71936.1 | EGM71943.1 | SOHN41_00004 | SOHN41_00011 | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | NAD(FAD)-utilizing dehydrogenase. | 0.469 |
EGM71936.1 | gpsA | SOHN41_00004 | SOHN41_00010 | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.563 |
EGM71943.1 | EGM71936.1 | SOHN41_00011 | SOHN41_00004 | NAD(FAD)-utilizing dehydrogenase. | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | 0.469 |
EGM71943.1 | gpsA | SOHN41_00011 | SOHN41_00010 | NAD(FAD)-utilizing dehydrogenase. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.627 |
EGM71943.1 | secB | SOHN41_00011 | SOHN41_00009 | NAD(FAD)-utilizing dehydrogenase. | Protein export cytoplasm chaperone protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.422 |
gpsA | EGM71936.1 | SOHN41_00010 | SOHN41_00004 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | 0.563 |
gpsA | EGM71943.1 | SOHN41_00010 | SOHN41_00011 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | NAD(FAD)-utilizing dehydrogenase. | 0.627 |
gpsA | secB | SOHN41_00010 | SOHN41_00009 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Protein export cytoplasm chaperone protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.894 |
secB | EGM71943.1 | SOHN41_00009 | SOHN41_00011 | Protein export cytoplasm chaperone protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | NAD(FAD)-utilizing dehydrogenase. | 0.422 |
secB | gpsA | SOHN41_00009 | SOHN41_00010 | Protein export cytoplasm chaperone protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.894 |