STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM71959.1Sucrose repressor, LacI family. (371 aa)    
Predicted Functional Partners:
EGM69042.1
Glutamate synthase [NADPH] large chain.
    
 
 0.910
EGM71958.1
Cell wall-associated hydrolase.
       0.773
EGM71146.1
Galactose operon repressor, GalR-LacI family of transcriptional regulator.
  
     0.772
EGM70046.1
Phosphocarrier protein of PTS system.
   
 
 0.708
EGM68779.1
Phosphocarrier protein, nitrogen regulation associated.
   
 
 0.708
EGM70596.1
PTS system, glucose-specific IIB component / PTS system, glucose-specific IIC component.
    
 0.687
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
   0.668
EGM68159.1
Fructokinase.
 
 
 0.663
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
   0.622
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.603
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.