STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM71439.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EGM71440.1
Putative ATP/GTP binding protein.
       0.762
EGM71438.1
Transcriptional regulator, LysR family.
       0.664
EGM71441.1
Anaerobic dehydrogenase, typically selenocysteine-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.505
EGM71442.1
Fe-S-cluster-containing hydrogenase component 1.
       0.495
EGM71443.1
Putative oxidoreductase component of anaerobic dehydrogenase; Functional role page for chaperone protein TorD.
       0.495
EGM71437.1
Hypothetical protein.
       0.469
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.