Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGM69264.1 | EGM69269.1 | SOHN41_02720 | SOHN41_02725 | Positive regulator of CheA protein activity (CheW). | Signal transduction histidine kinase CheA. | 0.999 |
EGM69264.1 | EGM69370.1 | SOHN41_02720 | SOHN41_02629 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein CheV. | 0.960 |
EGM69264.1 | EGM69678.1 | SOHN41_02720 | SOHN41_02290 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein CheV. | 0.964 |
EGM69264.1 | EGM70009.1 | SOHN41_02720 | SOHN41_01902 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.941 |
EGM69264.1 | EGM70013.1 | SOHN41_02720 | SOHN41_01906 | Positive regulator of CheA protein activity (CheW). | Signal transduction histidine kinase CheA. | 0.999 |
EGM69264.1 | EGM71407.1 | SOHN41_02720 | SOHN41_01141 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein CheV. | 0.963 |
EGM69264.1 | EGM71408.1 | SOHN41_02720 | SOHN41_01142 | Positive regulator of CheA protein activity (CheW). | Chemotaxis protein methyltransferase CheR. | 0.950 |
EGM69264.1 | EGM71579.1 | SOHN41_02720 | SOHN41_00493 | Positive regulator of CheA protein activity (CheW). | Methyl-accepting chemotaxis protein. | 0.990 |
EGM69264.1 | cheB | SOHN41_02720 | SOHN41_01900 | Positive regulator of CheA protein activity (CheW). | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.993 |
EGM69264.1 | cheB-2 | SOHN41_02720 | SOHN41_02724 | Positive regulator of CheA protein activity (CheW). | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
EGM69269.1 | EGM69264.1 | SOHN41_02725 | SOHN41_02720 | Signal transduction histidine kinase CheA. | Positive regulator of CheA protein activity (CheW). | 0.999 |
EGM69269.1 | EGM69370.1 | SOHN41_02725 | SOHN41_02629 | Signal transduction histidine kinase CheA. | Chemotaxis protein CheV. | 0.999 |
EGM69269.1 | EGM69678.1 | SOHN41_02725 | SOHN41_02290 | Signal transduction histidine kinase CheA. | Chemotaxis protein CheV. | 0.999 |
EGM69269.1 | EGM70009.1 | SOHN41_02725 | SOHN41_01902 | Signal transduction histidine kinase CheA. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.947 |
EGM69269.1 | EGM70013.1 | SOHN41_02725 | SOHN41_01906 | Signal transduction histidine kinase CheA. | Signal transduction histidine kinase CheA. | 0.927 |
EGM69269.1 | EGM71407.1 | SOHN41_02725 | SOHN41_01141 | Signal transduction histidine kinase CheA. | Chemotaxis protein CheV. | 0.999 |
EGM69269.1 | EGM71408.1 | SOHN41_02725 | SOHN41_01142 | Signal transduction histidine kinase CheA. | Chemotaxis protein methyltransferase CheR. | 0.958 |
EGM69269.1 | EGM71579.1 | SOHN41_02725 | SOHN41_00493 | Signal transduction histidine kinase CheA. | Methyl-accepting chemotaxis protein. | 0.992 |
EGM69269.1 | cheB | SOHN41_02725 | SOHN41_01900 | Signal transduction histidine kinase CheA. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
EGM69269.1 | cheB-2 | SOHN41_02725 | SOHN41_02724 | Signal transduction histidine kinase CheA. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
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