STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM70340.1Peptide transport system permease protein sapC. (296 aa)    
Predicted Functional Partners:
EGM70338.1
Peptide transport system ATP-binding protein sapF.
 
 0.999
EGM70339.1
Peptide transport system ATP-binding protein SapD; Belongs to the ABC transporter superfamily.
 
 0.999
EGM70341.1
Peptide transport periplasmic protein sapA; Overlaps another CDS with the same product name.
 
 0.996
EGM70342.1
Peptide transport periplasmic protein sapA; Overlaps another CDS with the same product name.
 
 0.992
fabV
Short-chain alcohol dehydrogenase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.
       0.520
EGM70345.1
Phage shock protein B.
 
     0.505
EGM70344.1
Phage shock protein A.
 
     0.501
EGM70343.1
Psp operon transcriptional activator.
       0.471
EGM70346.1
Phage shock protein C.
 
     0.465
EGM71019.1
Amino acid ABC transporter, ATP-binding protein.
 
     0.424
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.