Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGM70063.1 | EGM70064.1 | SOHN41_01956 | SOHN41_01957 | degT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Alcohol dehydrogenase, iron-containing protein. | 0.968 |
EGM70063.1 | EGM70066.1 | SOHN41_01956 | SOHN41_01959 | degT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.477 |
EGM70063.1 | kdsB | SOHN41_01956 | SOHN41_01958 | degT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO8N (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in the Shewanella genus. Belongs to the KdsB family. | 0.748 |
EGM70064.1 | EGM70063.1 | SOHN41_01957 | SOHN41_01956 | Alcohol dehydrogenase, iron-containing protein. | degT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.968 |
EGM70064.1 | EGM70066.1 | SOHN41_01957 | SOHN41_01959 | Alcohol dehydrogenase, iron-containing protein. | Hypothetical protein. | 0.483 |
EGM70064.1 | kdsB | SOHN41_01957 | SOHN41_01958 | Alcohol dehydrogenase, iron-containing protein. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO8N (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in the Shewanella genus. Belongs to the KdsB family. | 0.929 |
EGM70066.1 | EGM70063.1 | SOHN41_01959 | SOHN41_01956 | Hypothetical protein. | degT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.477 |
EGM70066.1 | EGM70064.1 | SOHN41_01959 | SOHN41_01957 | Hypothetical protein. | Alcohol dehydrogenase, iron-containing protein. | 0.483 |
EGM70066.1 | kdsB | SOHN41_01959 | SOHN41_01958 | Hypothetical protein. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO8N (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in the Shewanella genus. Belongs to the KdsB family. | 0.668 |
kdsB | EGM70063.1 | SOHN41_01958 | SOHN41_01956 | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO8N (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in the Shewanella genus. Belongs to the KdsB family. | degT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.748 |
kdsB | EGM70064.1 | SOHN41_01958 | SOHN41_01957 | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO8N (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in the Shewanella genus. Belongs to the KdsB family. | Alcohol dehydrogenase, iron-containing protein. | 0.929 |
kdsB | EGM70066.1 | SOHN41_01958 | SOHN41_01959 | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO8N (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in the Shewanella genus. Belongs to the KdsB family. | Hypothetical protein. | 0.668 |