STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM70081.1Transporter, LysE family. (208 aa)    
Predicted Functional Partners:
EGM70082.1
Transcriptional regulator, GntR family domain / Aspartate aminotransferase.
 
     0.656
EGM70043.1
Hypothetical protein.
  
 
   0.538
EGM68596.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
    
   0.489
EGM71493.1
Lysine exporter protein (LYSE/YGGA).
  
     0.462
EGM70080.1
Putative sulfate permease.
       0.455
EGM69713.1
Transporter, LysE family.
  
     0.452
EGM71071.1
Transcriptional regulator, GntR family domain / Aspartate aminotransferase.
 
     0.405
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.