Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGM68181.1 | EGM69702.1 | SOHN41_03673 | SOHN41_02314 | ABC-type amino acid transport/signal transduction system, periplasmic component. | Hypothetical protein. | 0.737 |
EGM68181.1 | astE | SOHN41_03673 | SOHN41_02019 | ABC-type amino acid transport/signal transduction system, periplasmic component. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.692 |
EGM69225.1 | EGM70497.1 | SOHN41_02770 | SOHN41_01510 | Aspartokinase / Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Glutamate decarboxylase, eukaryotic type. | 0.633 |
EGM69225.1 | astE | SOHN41_02770 | SOHN41_02019 | Aspartokinase / Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.523 |
EGM69702.1 | EGM68181.1 | SOHN41_02314 | SOHN41_03673 | Hypothetical protein. | ABC-type amino acid transport/signal transduction system, periplasmic component. | 0.737 |
EGM69702.1 | EGM71633.1 | SOHN41_02314 | SOHN41_00549 | Hypothetical protein. | ABC-type amino acid transport/signal transduction system, periplasmic component. | 0.710 |
EGM69702.1 | astE | SOHN41_02314 | SOHN41_02019 | Hypothetical protein. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.529 |
EGM69772.1 | EGM70497.1 | SOHN41_02193 | SOHN41_01510 | NAD-specific glutamate dehydrogenase, large form. | Glutamate decarboxylase, eukaryotic type. | 0.550 |
EGM69772.1 | astB | SOHN41_02193 | SOHN41_01688 | NAD-specific glutamate dehydrogenase, large form. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.760 |
EGM69772.1 | astE | SOHN41_02193 | SOHN41_02019 | NAD-specific glutamate dehydrogenase, large form. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.957 |
EGM70497.1 | EGM69225.1 | SOHN41_01510 | SOHN41_02770 | Glutamate decarboxylase, eukaryotic type. | Aspartokinase / Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.633 |
EGM70497.1 | EGM69772.1 | SOHN41_01510 | SOHN41_02193 | Glutamate decarboxylase, eukaryotic type. | NAD-specific glutamate dehydrogenase, large form. | 0.550 |
EGM70497.1 | EGM70588.1 | SOHN41_01510 | SOHN41_01344 | Glutamate decarboxylase, eukaryotic type. | Acetyltransferase, GNAT family. | 0.615 |
EGM70497.1 | astE | SOHN41_01510 | SOHN41_02019 | Glutamate decarboxylase, eukaryotic type. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.561 |
EGM70523.1 | EGM70588.1 | SOHN41_01279 | SOHN41_01344 | Hypothetical protein. | Acetyltransferase, GNAT family. | 0.766 |
EGM70523.1 | astE | SOHN41_01279 | SOHN41_02019 | Hypothetical protein. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.558 |
EGM70586.1 | EGM70588.1 | SOHN41_01342 | SOHN41_01344 | Hypothetical protein. | Acetyltransferase, GNAT family. | 0.779 |
EGM70586.1 | astE | SOHN41_01342 | SOHN41_02019 | Hypothetical protein. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.535 |
EGM70588.1 | EGM70497.1 | SOHN41_01344 | SOHN41_01510 | Acetyltransferase, GNAT family. | Glutamate decarboxylase, eukaryotic type. | 0.615 |
EGM70588.1 | EGM70523.1 | SOHN41_01344 | SOHN41_01279 | Acetyltransferase, GNAT family. | Hypothetical protein. | 0.766 |
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