STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
astESuccinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. (344 aa)    
Predicted Functional Partners:
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
 
  
 0.959
EGM69772.1
NAD-specific glutamate dehydrogenase, large form.
  
 
  0.957
EGM68181.1
ABC-type amino acid transport/signal transduction system, periplasmic component.
  
     0.692
EGM71633.1
ABC-type amino acid transport/signal transduction system, periplasmic component.
  
     0.669
EGM70588.1
Acetyltransferase, GNAT family.
  
     0.621
EGM70497.1
Glutamate decarboxylase, eukaryotic type.
  
  
  0.561
EGM70523.1
Hypothetical protein.
  
     0.558
EGM70586.1
Hypothetical protein.
  
     0.535
EGM69702.1
Hypothetical protein.
  
     0.529
EGM69225.1
Aspartokinase / Homoserine dehydrogenase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
    
  0.523
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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