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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM69950.1Hypothetical protein. (90 aa)    
Predicted Functional Partners:
EGM69949.1
Hypothetical protein.
       0.780
EGM68194.1
Acetolactate synthase small subunit.
  
     0.759
seqA
SeqA protein, negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
 
    0.743
EGM69649.1
Inosine-guanosine kinase.
  
     0.735
EGM69951.1
Flavodoxin 1; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
  
  
 0.690
EGM70911.1
Hypothetical lipoprotein YajG precursor.
  
    0.600
EGM69913.1
Hypothetical protein; Belongs to the UPF0352 family.
  
    0.582
EGM70873.1
Hypothetical protein.
   
    0.550
EGM69865.1
Protein YcgL.
  
     0.549
EGM69887.1
Protein yifE.
  
     0.542
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.