STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGM69815.1Tryptophan halogenase; Overlaps another CDS with the same product name. (176 aa)    
Predicted Functional Partners:
EGM69816.1
Tryptophan halogenase; Overlaps another CDS with the same product name.
     0.987
EGM69814.1
Putative maltose-specific TonB-dependent receptor.
 
     0.882
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.807
EGM69042.1
Glutamate synthase [NADPH] large chain.
  
 
 0.783
EGM69097.1
Pass1 protein.
 
     0.782
EGM69096.1
Peptide transport system permease protein sapC.
 
     0.775
EGM69094.1
Putative b-glucoside-specific TonB-dependent outer membrane receptor.
 
     0.769
EGM70563.1
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor.
 
     0.759
EGM69142.1
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor.
 
     0.755
EGM69213.1
Putative maltose-specific TonB-dependent receptor.
 
     0.748
Your Current Organism:
Shewanella sp. HN41
NCBI taxonomy Id: 327275
Other names: S. sp. HN-41, Shewanella sp. HN-41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.