Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGM69715.1 | EGM69719.1 | SOHN41_02327 | SOHN41_02331 | Gamma-glutamyltranspeptidase. | Xaa-His dipeptidase. | 0.918 |
EGM69715.1 | EGM69778.1 | SOHN41_02327 | SOHN41_02199 | Gamma-glutamyltranspeptidase. | Membrane alanine aminopeptidase N. | 0.913 |
EGM69715.1 | EGM71032.1 | SOHN41_02327 | SOHN41_00766 | Gamma-glutamyltranspeptidase. | Membrane alanine aminopeptidase N. | 0.912 |
EGM69715.1 | EGM71096.1 | SOHN41_02327 | SOHN41_00830 | Gamma-glutamyltranspeptidase. | Aminoacyl-histidine dipeptidase (Peptidase D). | 0.916 |
EGM69715.1 | EGM71098.1 | SOHN41_02327 | SOHN41_00832 | Gamma-glutamyltranspeptidase. | Peptidase M17, leucyl aminopeptidase. | 0.913 |
EGM69715.1 | EGM71478.1 | SOHN41_02327 | SOHN41_00390 | Gamma-glutamyltranspeptidase. | Peptidase B; Probably plays an important role in intracellular peptide degradation. | 0.913 |
EGM69715.1 | pepA | SOHN41_02327 | SOHN41_00467 | Gamma-glutamyltranspeptidase. | Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.913 |
EGM69715.1 | pepA-2 | SOHN41_02327 | SOHN41_02802 | Gamma-glutamyltranspeptidase. | Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.913 |
EGM69719.1 | EGM69715.1 | SOHN41_02331 | SOHN41_02327 | Xaa-His dipeptidase. | Gamma-glutamyltranspeptidase. | 0.918 |
EGM69719.1 | EGM69778.1 | SOHN41_02331 | SOHN41_02199 | Xaa-His dipeptidase. | Membrane alanine aminopeptidase N. | 0.925 |
EGM69719.1 | EGM70197.1 | SOHN41_02331 | SOHN41_01791 | Xaa-His dipeptidase. | Aspartate aminotransferase. | 0.914 |
EGM69719.1 | EGM71032.1 | SOHN41_02331 | SOHN41_00766 | Xaa-His dipeptidase. | Membrane alanine aminopeptidase N. | 0.925 |
EGM69719.1 | EGM71096.1 | SOHN41_02331 | SOHN41_00830 | Xaa-His dipeptidase. | Aminoacyl-histidine dipeptidase (Peptidase D). | 0.925 |
EGM69719.1 | EGM71098.1 | SOHN41_02331 | SOHN41_00832 | Xaa-His dipeptidase. | Peptidase M17, leucyl aminopeptidase. | 0.915 |
EGM69719.1 | EGM71478.1 | SOHN41_02331 | SOHN41_00390 | Xaa-His dipeptidase. | Peptidase B; Probably plays an important role in intracellular peptide degradation. | 0.915 |
EGM69719.1 | glyA | SOHN41_02331 | SOHN41_00995 | Xaa-His dipeptidase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.946 |
EGM69719.1 | pepA | SOHN41_02331 | SOHN41_00467 | Xaa-His dipeptidase. | Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.915 |
EGM69719.1 | pepA-2 | SOHN41_02331 | SOHN41_02802 | Xaa-His dipeptidase. | Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.915 |
EGM69778.1 | EGM69715.1 | SOHN41_02199 | SOHN41_02327 | Membrane alanine aminopeptidase N. | Gamma-glutamyltranspeptidase. | 0.913 |
EGM69778.1 | EGM69719.1 | SOHN41_02199 | SOHN41_02331 | Membrane alanine aminopeptidase N. | Xaa-His dipeptidase. | 0.925 |
page 1 of 6