Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGM68288.1 | EGM70304.1 | SOHN41_03780 | SOHN41_01666 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.569 |
EGM68288.1 | EGM71713.1 | SOHN41_03780 | SOHN41_00314 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase. | 0.469 |
EGM68288.1 | zapE | SOHN41_03780 | SOHN41_03097 | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | ATPase, AFG1 family; Reduces the stability of FtsZ polymers in the presence of ATP. | 0.453 |
EGM69025.1 | EGM70301.1 | SOHN41_02833 | SOHN41_01663 | ygfY. | Succinate dehydrogenase cytochrome b-556 subunit. | 0.542 |
EGM69025.1 | EGM70302.1 | SOHN41_02833 | SOHN41_01664 | ygfY. | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.656 |
EGM69025.1 | EGM70303.1 | SOHN41_02833 | SOHN41_01665 | ygfY. | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.951 |
EGM69025.1 | EGM70304.1 | SOHN41_02833 | SOHN41_01666 | ygfY. | Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.665 |
EGM69025.1 | zapE | SOHN41_02833 | SOHN41_03097 | ygfY. | ATPase, AFG1 family; Reduces the stability of FtsZ polymers in the presence of ATP. | 0.525 |
EGM70301.1 | EGM69025.1 | SOHN41_01663 | SOHN41_02833 | Succinate dehydrogenase cytochrome b-556 subunit. | ygfY. | 0.542 |
EGM70301.1 | EGM70302.1 | SOHN41_01663 | SOHN41_01664 | Succinate dehydrogenase cytochrome b-556 subunit. | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.999 |
EGM70301.1 | EGM70303.1 | SOHN41_01663 | SOHN41_01665 | Succinate dehydrogenase cytochrome b-556 subunit. | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.999 |
EGM70301.1 | EGM70304.1 | SOHN41_01663 | SOHN41_01666 | Succinate dehydrogenase cytochrome b-556 subunit. | Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.999 |
EGM70301.1 | zapE | SOHN41_01663 | SOHN41_03097 | Succinate dehydrogenase cytochrome b-556 subunit. | ATPase, AFG1 family; Reduces the stability of FtsZ polymers in the presence of ATP. | 0.553 |
EGM70302.1 | EGM69025.1 | SOHN41_01664 | SOHN41_02833 | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | ygfY. | 0.656 |
EGM70302.1 | EGM70301.1 | SOHN41_01664 | SOHN41_01663 | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Succinate dehydrogenase cytochrome b-556 subunit. | 0.999 |
EGM70302.1 | EGM70303.1 | SOHN41_01664 | SOHN41_01665 | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.998 |
EGM70302.1 | EGM70304.1 | SOHN41_01664 | SOHN41_01666 | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.999 |
EGM70302.1 | zapE | SOHN41_01664 | SOHN41_03097 | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | ATPase, AFG1 family; Reduces the stability of FtsZ polymers in the presence of ATP. | 0.508 |
EGM70303.1 | EGM69025.1 | SOHN41_01665 | SOHN41_02833 | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | ygfY. | 0.951 |
EGM70303.1 | EGM70301.1 | SOHN41_01665 | SOHN41_01663 | Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Succinate dehydrogenase cytochrome b-556 subunit. | 0.999 |
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