STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000738005_00386Unannotated protein. (1073 aa)    
Predicted Functional Partners:
GCA_000738005_01789
Unannotated protein.
  
     0.654
GCA_000738005_00388
Unannotated protein.
 
     0.632
GCA_000738005_00393
Unannotated protein.
 
     0.632
GCA_000738005_00392
Unannotated protein.
 
  
  0.530
GCA_000738005_01128
Unannotated protein.
  
     0.525
GCA_000738005_00193
Unannotated protein.
     
 0.482
GCA_000738005_00526
Unannotated protein.
    
  0.465
GCA_000738005_00434
Unannotated protein.
  
  
  0.456
GCA_000738005_00387
Unannotated protein.
       0.431
Your Current Organism:
Bifidobacterium crudilactis
NCBI taxonomy Id: 327277
Other names: B. crudilactis, Bifidobacterium crudilactis Delcenserie et al. 2013, Bifidobacterium sp. FR47/3, Bifidobacterium sp. FR59/b/2, Bifidobacterium sp. FR62/b/3, CNCM I-3342, LMG 23609, LMG:23609, strain FR62/b/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.