STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000738005_00898Unannotated protein. (865 aa)    
Predicted Functional Partners:
GCA_000738005_00069
Unannotated protein.
  
 
 0.958
GCA_000738005_00070
Unannotated protein.
  
 
 0.958
GCA_000738005_01333
Unannotated protein.
  
 0.945
GCA_000738005_01334
Unannotated protein.
   
 0.938
GCA_000738005_00067
Unannotated protein.
  
 0.919
GCA_000738005_01141
Unannotated protein.
  
 0.919
GCA_000738005_00068
Unannotated protein.
  
 
 0.851
GCA_000738005_00588
Unannotated protein.
  
 
 0.834
GCA_000738005_00641
Unannotated protein.
   
 0.755
GCA_000738005_00911
Unannotated protein.
   
 0.755
Your Current Organism:
Bifidobacterium crudilactis
NCBI taxonomy Id: 327277
Other names: B. crudilactis, Bifidobacterium crudilactis Delcenserie et al. 2013, Bifidobacterium sp. FR47/3, Bifidobacterium sp. FR59/b/2, Bifidobacterium sp. FR62/b/3, CNCM I-3342, LMG 23609, LMG:23609, strain FR62/b/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.