STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000738005_01377Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000738005_01515
Unannotated protein.
 
 
 0.970
GCA_000738005_01059
Unannotated protein.
  
 0.960
GCA_000738005_01433
Unannotated protein.
  
 
 0.940
GCA_000738005_00281
Unannotated protein.
  
 0.890
GCA_000738005_01056
Unannotated protein.
 
 
0.839
GCA_000738005_01058
Unannotated protein.
  
 
 0.812
GCA_000738005_01378
Unannotated protein.
  
    0.704
GCA_000738005_01376
Unannotated protein.
       0.615
GCA_000738005_01618
Unannotated protein.
  
    0.571
GCA_000738005_00645
Unannotated protein.
    
 0.531
Your Current Organism:
Bifidobacterium crudilactis
NCBI taxonomy Id: 327277
Other names: B. crudilactis, Bifidobacterium crudilactis Delcenserie et al. 2013, Bifidobacterium sp. FR47/3, Bifidobacterium sp. FR59/b/2, Bifidobacterium sp. FR62/b/3, CNCM I-3342, LMG 23609, LMG:23609, strain FR62/b/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.