STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000738005_01837Unannotated protein. (289 aa)    
Predicted Functional Partners:
GCA_000738005_01838
Unannotated protein.
       0.723
GCA_000738005_00911
Unannotated protein.
  
     0.716
GCA_000738005_01345
Unannotated protein.
  
     0.709
GCA_000738005_00547
Unannotated protein.
  
     0.676
GCA_000738005_01623
Unannotated protein.
  
     0.672
GCA_000738005_01775
Unannotated protein.
  
     0.651
GCA_000738005_00124
Unannotated protein.
  
     0.626
GCA_000738005_00821
Unannotated protein.
  
     0.592
GCA_000738005_01839
Unannotated protein.
  
    0.579
GCA_000738005_01070
Unannotated protein.
  
     0.578
Your Current Organism:
Bifidobacterium crudilactis
NCBI taxonomy Id: 327277
Other names: B. crudilactis, Bifidobacterium crudilactis Delcenserie et al. 2013, Bifidobacterium sp. FR47/3, Bifidobacterium sp. FR59/b/2, Bifidobacterium sp. FR62/b/3, CNCM I-3342, LMG 23609, LMG:23609, strain FR62/b/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.