Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AU210_000808 | AU210_006077 | A0A2H3I1L0 | A0A2H3HJZ3 | ERCC4 domain-containing protein. | DNA polymerase. | 0.784 |
AU210_000808 | AU210_009188 | A0A2H3I1L0 | A0A2H3H7V6 | ERCC4 domain-containing protein. | ERCC4 domain-containing protein. | 0.979 |
AU210_000808 | AU210_015599 | A0A2H3I1L0 | A0A2H3FSX9 | ERCC4 domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.606 |
AU210_001624 | AU210_006247 | A0A2H3I4E0 | A0A2H3H4V8 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
AU210_001624 | AU210_008136 | A0A2H3I4E0 | A0A2H3HEM0 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
AU210_001624 | AU210_011493 | A0A2H3I4E0 | A0A2H3GM23 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.973 |
AU210_001624 | AU210_015599 | A0A2H3I4E0 | A0A2H3FSX9 | Small nuclear ribonucleoprotein G. | ANK_REP_REGION domain-containing protein. | 0.500 |
AU210_002746 | AU210_015599 | A0A2H3HNK4 | A0A2H3FSX9 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | ANK_REP_REGION domain-containing protein. | 0.488 |
AU210_006077 | AU210_000808 | A0A2H3HJZ3 | A0A2H3I1L0 | DNA polymerase. | ERCC4 domain-containing protein. | 0.784 |
AU210_006077 | AU210_006088 | A0A2H3HJZ3 | A0A2H3H6E1 | DNA polymerase. | Uncharacterized protein. | 0.999 |
AU210_006077 | AU210_009188 | A0A2H3HJZ3 | A0A2H3H7V6 | DNA polymerase. | ERCC4 domain-containing protein. | 0.688 |
AU210_006077 | AU210_015599 | A0A2H3HJZ3 | A0A2H3FSX9 | DNA polymerase. | ANK_REP_REGION domain-containing protein. | 0.602 |
AU210_006088 | AU210_006077 | A0A2H3H6E1 | A0A2H3HJZ3 | Uncharacterized protein. | DNA polymerase. | 0.999 |
AU210_006088 | AU210_015599 | A0A2H3H6E1 | A0A2H3FSX9 | Uncharacterized protein. | ANK_REP_REGION domain-containing protein. | 0.656 |
AU210_006247 | AU210_001624 | A0A2H3H4V8 | A0A2H3I4E0 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein G. | 0.999 |
AU210_006247 | AU210_008136 | A0A2H3H4V8 | A0A2H3HEM0 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
AU210_006247 | AU210_011493 | A0A2H3H4V8 | A0A2H3GM23 | Small nuclear ribonucleoprotein Sm D2. | Uncharacterized protein. | 0.981 |
AU210_006247 | AU210_015599 | A0A2H3H4V8 | A0A2H3FSX9 | Small nuclear ribonucleoprotein Sm D2. | ANK_REP_REGION domain-containing protein. | 0.491 |
AU210_006487 | AU210_015599 | A0A2H3H5E2 | A0A2H3FSX9 | WD_REPEATS_REGION domain-containing protein. | ANK_REP_REGION domain-containing protein. | 0.568 |
AU210_008136 | AU210_001624 | A0A2H3HEM0 | A0A2H3I4E0 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Small nuclear ribonucleoprotein G. | 0.999 |
page 1 of 2