STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_015599ANK_REP_REGION domain-containing protein. (418 aa)    
Predicted Functional Partners:
AU210_006088
Uncharacterized protein.
    
 0.656
AU210_000808
ERCC4 domain-containing protein.
    
 0.606
AU210_011493
Uncharacterized protein.
    
 0.604
AU210_006077
DNA polymerase.
   
 0.602
AU210_006487
WD_REPEATS_REGION domain-containing protein.
    
  0.568
AU210_009188
ERCC4 domain-containing protein.
    
 0.552
AU210_008136
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.550
AU210_001624
Small nuclear ribonucleoprotein G.
    
  0.500
AU210_006247
Small nuclear ribonucleoprotein Sm D2.
    
  0.491
AU210_002746
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.488
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
Server load: low (14%) [HD]