STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AU210_016167TPR_REGION domain-containing protein. (980 aa)    
Predicted Functional Partners:
AU210_003354
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.717
AU210_003246
CDC73_C domain-containing protein.
    
 0.683
AU210_004111
Uncharacterized protein.
    
 0.681
AU210_010609
Uncharacterized protein.
    
 0.680
AU210_010793
DOC domain-containing protein.
    
 0.680
AU210_004094
Uncharacterized protein.
    
 0.678
AU210_001081
Uncharacterized protein.
    
 0.673
AU210_009657
ANAPC5 domain-containing protein.
    
 0.669
AU210_000892
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.656
AU210_004207
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.594
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.